Trajectorynet: A dynamic optimal transport network for modeling cellular dynamics A Tong, J Huang, G Wolf, D Van Dijk, S Krishnaswamy International conference on machine learning, 9526-9536, 2020 | 156 | 2020 |
Guided fracture of films on soft substrates to create micro/nano-feature arrays with controlled periodicity BC Kim, T Matsuoka, C Moraes, J Huang, MD Thouless, S Takayama Scientific reports 3 (1), 3027, 2013 | 85 | 2013 |
Nanoscale squeezing in elastomeric nanochannels for single chromatin linearization T Matsuoka, BC Kim, J Huang, NJ Douville, MD Thouless, S Takayama Nano letters 12 (12), 6480-6484, 2012 | 59 | 2012 |
Multiscale PHATE identifies multimodal signatures of COVID-19 M Kuchroo, J Huang, P Wong, JC Grenier, D Shung, A Tong, C Lucas, ... Nature biotechnology 40 (5), 681-691, 2022 | 56 | 2022 |
Fracture-based micro-and nanofabrication for biological applications BC Kim, C Moraes, J Huang, MD Thouless, S Takayama Biomaterials science 2 (3), 288-296, 2014 | 46 | 2014 |
Self-healing of pores in PLGAs J Huang, JM Mazzara, SP Schwendeman, MD Thouless Journal of Controlled Release 206, 20-29, 2015 | 41 | 2015 |
The control of crack arrays in thin films J Huang, BC Kim, S Takayama, MD Thouless Journal of materials science 49, 255-268, 2014 | 37 | 2014 |
Fracture‐based fabrication of normally closed, adjustable, and fully reversible microscale fluidic channels BC Kim, C Moraes, J Huang, T Matsuoka, MD Thouless, S Takayama Small 10 (19), 4020-4029, 2014 | 36 | 2014 |
Single-cell analysis reveals inflammatory interactions driving macular degeneration M Kuchroo, M DiStasio, E Song, E Calapkulu, L Zhang, M Ige, AH Sheth, ... Nature Communications 14 (1), 2589, 2023 | 35 | 2023 |
Multi-view manifold learning of human brain-state trajectories EL Busch, J Huang, A Benz, T Wallenstein, G Lajoie, G Wolf, ... Nature computational science 3 (3), 240-253, 2023 | 32 | 2023 |
Learning safe policies with expert guidance J Huang, F Wu, D Precup, Y Cai Advances in Neural Information Processing Systems 31, 2018 | 28 | 2018 |
Neural network predicts need for red blood cell transfusion for patients with acute gastrointestinal bleeding admitted to the intensive care unit D Shung, J Huang, E Castro, JK Tay, M Simonov, L Laine, R Batra, ... Scientific Reports 11 (1), 8827, 2021 | 19 | 2021 |
Multiscale PHATE exploration of SARS-CoV-2 data reveals multimodal signatures of disease M Kuchroo, J Huang, P Wong, JC Grenier, D Shung, A Tong, C Lucas, ... BioRxiv, 2020.11. 15.383661, 2020 | 17 | 2020 |
Loss of the Krüppel-like factor 4 tumor suppressor is associated with epithelial-mesenchymal transition in colorectal cancer KC Agbo, JZ Huang, AM Ghaleb, JL Williams, KR Shroyer, AB Bialkowska, ... Journal of cancer metastasis and treatment 5, 2019 | 16 | 2019 |
Exploring the geometry and topology of neural network loss landscapes S Horoi, J Huang, B Rieck, G Lajoie, G Wolf, S Krishnaswamy International Symposium on Intelligent Data Analysis, 171-184, 2022 | 15 | 2022 |
Learning shared neural manifolds from multi-subject FMRI data J Huang, E Busch, T Wallenstein, M Gerasimiuk, A Benz, G Lajoie, G Wolf, ... 2022 IEEE 32nd International Workshop on Machine Learning for Signal …, 2022 | 13 | 2022 |
The collapse and expansion of liquid-filled elastic channels and cracks F Meng, J Huang, MD Thouless Journal of Applied Mechanics 82 (10), 101009, 2015 | 7 | 2015 |
Topological analysis of single-cell data reveals shared glial landscape of macular degeneration and neurodegenerative diseases M Kuchroo, M DiStasio, E Calapkulu, M Ige, L Zhang, AH Sheth, M Menon, ... Biorxiv, 2021.01. 19.427286, 2021 | 6 | 2021 |
Time-inhomogeneous diffusion geometry and topology G Huguet, A Tong, B Rieck, J Huang, M Kuchroo, M Hirn, G Wolf, ... SIAM Journal on Mathematics of Data Science 5 (2), 346-372, 2023 | 4 | 2023 |
Visualizing high-dimensional trajectories on the loss-landscape of ANNs S Horoi, J Huang, G Wolf, S Krishnaswamy | 2 | 2021 |