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Domenico Fraccalvieri
Domenico Fraccalvieri
Istituto Gonzaga, Milano
Verified email at apps.gonzaga-milano.it - Homepage
Title
Cited by
Cited by
Year
Comparative analysis of homology models of the Ah receptor ligand binding domain: verification of structure-function predictions by site-directed mutagenesis of a non …
D Fraccalvieri, AA Soshilov, SI Karchner, DG Franks, A Pandini, L Bonati, ...
Biochemistry 52 (4), 714, 2013
752013
AHR Ligands: Promiscuity in Binding and Diversity in Response
D DeGroot, G He, D Fraccalvieri, L Bonati, A Pandini, MS Denison
The AH Receptor in Biology and Toxicology, 63-79, 2011
592011
Conformational and functional analysis of molecular dynamics trajectories by Self-Organising Maps
D Fraccalvieri, A Pandini, F Stella, L Bonati
BMC Bioinformatics 12 (1), 158, 2011
572011
Specific Ligand Binding Domain Residues Confer Low Dioxin Responsiveness to AHR1β of Xenopus laevis
C Odio, SA Holzman, MS Denison, D Fraccalvieri, L Bonati, DG Franks, ...
Biochemistry, 2013
282013
An aryl hydrocarbon receptor from the salamander ambystoma mexicanum exhibits low sensitivity to 2, 3, 7, 8-tetrachlorodibenzo-p-dioxin
J Shoots, D Fraccalvieri, DG Franks, MS Denison, ME Hahn, L Bonati, ...
Environmental science & technology 49 (11), 6993, 2015
242015
Artificial Neural Networks For Efficient Clustering Of Conformational Ensembles And Their Potential For Medicinal Chemistry.
A Pandini, D Fraccalvieri, L Bonati
Current topics in medicinal chemistry, 2013
212013
Functional annotation of the mesophilic-like character of mutants in a cold-adapted enzyme by Self-Organising Map analysis of their molecular dynamics
D Fraccalvieri, M Tiberti, A Pandini, L Bonati, E Papaleo
Molecular BioSystems, 2012
202012
Ginsenosides are novel naturally-occurring aryl hydrocarbon receptor ligands
Q Hu, G He, J Zhao, A Soshilov, MS Denison, A Zhang, H Yin, ...
PloS one 8 (6), e66258, 2013
192013
Identification of potential aryl hydrocarbon receptor ligands by virtual screening of industrial chemicals
M Larsson, D Fraccalvieri, CD Andersson, L Bonati, A Linusson, ...
Environmental Science and Pollution Research, 1-14, 2017
172017
Design of gliadin peptide analogues with low affinity for the celiac disease associated HLA–DQ2 protein
D Fraccalvieri, S Motta, G Galliani, L Cavaletti, L Bonati
Molecular BioSystems 10 (8), 2064-2073, 2014
42014
Self Organizing Maps to efficiently cluster and functionally interpret protein conformational ensembles
D Fraccalvieri, L Bonati, F Stella
arXiv preprint arXiv:1309.7694, 2013
42013
Comparison of protein dynamics: a new methodology based on self-organizing maps
D FRACCALVIERI
Università degli Studi di Milano-Bicocca, 2011
12011
Functional interpretation of protein conformational ensembles using self-organizing maps and network components
D Fraccalvieri, L Bonati, A Pandini, F Stella
3DSIG 2013: Structural Bioinformatics And Computational Biophysics-19-20 July, 2013
2013
Functional annotation of protein conformations by Self-Organizing Maps
D Fraccalvieri, A Pandini, F Stella, L Bonati
ECCB'12: 11th European Conference on Computational Biology, 2012
2012
A new methodology for the comparison of protein dynamics based on self-organizing maps
D Fraccalvieri, F Stella, A Pandini, L Bonati
3DSIG 2011: Structural Bioinformatics & Computational Biophysics, 2011
2011
The role of flexibility in binding via Molecular Dynamics simulations: promiscuity and transient complexes formation
D Fraccalvieri
HPC-Europa2 Report 2010, 2010
2010
Comparison of proteins flexibilities by self-organizing maps: the test case of SH3 and its mutants
D Fraccalvieri, A Pandini, L Bonati
BITS 2009, 2009
2009
Comparison of protein flexibilities: a study case on wild type and mutants of the SH3 domain
D FRACCALVIERI, L BONATI, A PANDINI
ECCB08" European Conference on Computational Biology 2008", 2008
2008
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Articles 1–18