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Harish Swaminathan
Harish Swaminathan
Ring Therapeutics
Dirección de correo verificada de ringtx.com
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Determination of RNA structural diversity and its role in HIV-1 RNA splicing
PJ Tomezsko, VDA Corbin, P Gupta, H Swaminathan, M Glasgow, ...
Nature 582 (7812), 438-442, 2020
1832020
NOCIt: a computational method to infer the number of contributors to DNA samples analyzed by STR genotyping
H Swaminathan, CM Grgicak, M Medard, DS Lun
Forensic Science International: Genetics 16, 172-180, 2015
902015
Global genome analysis reveals a vast and dynamic anellovirus landscape within the human virome
CA Arze, S Springer, G Dudas, S Patel, A Bhattacharyya, H Swaminathan, ...
Cell Host & Microbe 29 (8), 1305-1315. e6, 2021
752021
CEESIt: A computational tool for the interpretation of STR mixtures
H Swaminathan, A Garg, CM Grgicak, M Medard, DS Lun
Forensic Science International: Genetics 22, 149-160, 2016
552016
Viral RNA structure analysis using DMS-MaPseq
P Tomezsko, H Swaminathan, S Rouskin
Methods 183, 68-75, 2020
262020
Four model variants within a continuous forensic DNA mixture interpretation framework: Effects on evidential inference and reporting
H Swaminathan, MO Qureshi, CM Grgicak, K Duffy, DS Lun
PloS one 13 (11), e0207599, 2018
242018
Inferring the number of contributors to complex DNA mixtures using three methods: exploring the limits of low‐template DNA interpretation
LE Alfonse, G Tejada, H Swaminathan, DS Lun, CM Grgicak
Journal of forensic sciences 62 (2), 308-316, 2017
242017
Production of high-fidelity electropherograms results in improved and consistent DNA interpretation: Standardizing the forensic validation process
KC Peters, H Swaminathan, J Sheehan, KR Duffy, DS Lun, CM Grgicak
Forensic Science International: Genetics 31, 160-170, 2017
182017
Towards developing forensically relevant single-cell pipelines by incorporating direct-to-PCR extraction: compatibility, signal quality, and allele detection
N Sheth, H Swaminathan, AJ Gonzalez, KR Duffy, CM Grgicak
International Journal of Legal Medicine 135, 727-738, 2021
172021
Comprehensive profiling of antibody responses to the human anellome using programmable phage display
T Venkataraman, H Swaminathan, CA Arze, SM Jacobo, A Bhattacharyya, ...
Cell Reports 41 (12), 2022
162022
Anellovirus structure reveals a mechanism for immune evasion
S Liou, N Cohen, Y Zhang, NM Acharekar, H Rodgers, S Islam, L Zeheb, ...
Biorxiv, 2022.07. 01.498313, 2022
152022
Establishing a stable, repeatable platform for measuring changes in sperm DNA methylation
M Abbasi, AD Smith, H Swaminathan, P Sangngern, A Douglas, ...
Clinical epigenetics 10, 1-12, 2018
112018
DMS-MaPseq for genome-wide or targeted RNA structure probing in vitro and in vivo
P Tomezsko, H Swaminathan, S Rouskin
Functional Analysis of Long Non-Coding RNAs: Methods and Protocols, 219-238, 2021
102021
Human anelloviruses produced by recombinant expression of synthetic genomes
DM Nawandar, M Trivedi, G Bounoutas, K Lebo, C Prince, C Scano, ...
Biorxiv, 2022.04. 28.489885, 2022
62022
Equivalent T cell epitope promiscuity in ecologically diverse human pathogens
KE Wiens, H Swaminathan, R Copin, DS Lun, JD Ernst
PloS one 8 (8), e73124, 2013
42013
The Development and Release of a Collection of Computational Tools and a Large-Scale Empirical Data Set for Validation: The PROVEDIt Initiative
LE Alfonse, AD Garrett, H Swaminathan, KC Peters, G Wellner, ...
International Symposium on Human Identification, 2016
32016
Anelloviruses are highly diverse, ubiquitous commensal denizens of the human virome, and show promising properties as novel gene delivery vectors
DM Nawanar, CA Arze, J Timpona, N Boisvert, M Trivedi, F Diaz, K Lebo, ...
HUMAN GENE THERAPY 32 (19-20), A130-A130, 2021
12021
Computational methods for the interpretation of forensic DNA samples
H Swaminathan
Rutgers University-Camden Graduate School, 2015
12015
Structure of anellovirus-like particles reveal a mechanism for immune evasion
S Liou, R Boggavarapu, NR Cohen, Y Zhang, I Sharma, L Zeheb, ...
Nature Communications 15 (1), 7219, 2024
2024
Repeat RNA structure and protein interactions influence RAN translation and neurodegenerative phenotypes in models of FTD and ALS
I Malik, H Swaminathan, S Rouskin, PK Todd
Alzheimer's & Dementia 19, e063489, 2023
2023
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