| 1,135 genomes reveal the global pattern of polymorphism in Arabidopsis thaliana C Alonso-Blanco, J Andrade, C Becker, F Bemm, J Bergelson, ... Cell 166 (2), 481-491, 2016 | 1184 | 2016 |
| Cistrome: an integrative platform for transcriptional regulation studies T Liu, JA Ortiz, L Taing, CA Meyer, B Lee, Y Zhang, H Shin, SS Wong, ... Genome biology 12, 1-10, 2011 | 739 | 2011 |
| Epigenomic diversity in a global collection of Arabidopsis thaliana accessions T Kawakatsu, SC Huang, F Jupe, E Sasaki, RJ Schmitz, MA Urich, ... Cell 166 (2), 492-505, 2016 | 649 | 2016 |
| Healthy infants harbor intestinal bacteria that protect against food allergy T Feehley, CH Plunkett, R Bao, SM Choi Hong, E Culleen, P Belda-Ferre, ... Nature medicine 25 (3), 448-453, 2019 | 398 | 2019 |
| Density of immunogenic antigens does not explain the presence or absence of the T-cell–inflamed tumor microenvironment in melanoma S Spranger, JJ Luke, R Bao, Y Zha, KM Hernandez, Y Li, AP Gajewski, ... Proceedings of the National Academy of Sciences 113 (48), E7759-E7768, 2016 | 385 | 2016 |
| Proteomics reveals NNMT as a master metabolic regulator of cancer-associated fibroblasts MA Eckert, F Coscia, A Chryplewicz, JW Chang, KM Hernandez, S Pan, ... Nature 569 (7758), 723-728, 2019 | 379 | 2019 |
| Effective breast cancer combination therapy targeting BACH1 and mitochondrial metabolism J Lee, AE Yesilkanal, JP Wynne, C Frankenberger, J Liu, J Yan, M Elbaz, ... Nature 568 (7751), 254-258, 2019 | 281 | 2019 |
| Review of current methods, applications, and data management for the bioinformatics analysis of whole exome sequencing R Bao, L Huang, J Andrade, W Tan, WA Kibbe, H Jiang, G Feng Cancer informatics 13, CIN. S13779, 2014 | 278 | 2014 |
| Integrated molecular subtyping defines a curable oligometastatic state in colorectal liver metastasis SP Pitroda, NN Khodarev, L Huang, A Uppal, SC Wightman, S Ganai, ... Nature communications 9 (1), 1793, 2018 | 236 | 2018 |
| Genome-wide CRISPR/Cas9 screen identifies host factors essential for influenza virus replication J Han, JT Perez, C Chen, Y Li, A Benitez, M Kandasamy, Y Lee, ... Cell reports 23 (2), 596-607, 2018 | 216 | 2018 |
| Genomics of ovarian cancer progression reveals diverse metastatic trajectories including intraepithelial metastasis to the fallopian tube MA Eckert, S Pan, KM Hernandez, RM Loth, J Andrade, SL Volchenboum, ... Cancer discovery 6 (12), 1342-1351, 2016 | 204 | 2016 |
| Cancer therapies activate RIG-I-like receptor pathway through endogenous non-coding RNAs DRE Ranoa, AD Parekh, SP Pitroda, X Huang, T Darga, AC Wong, ... Oncotarget 7 (18), 26496, 2016 | 174 | 2016 |
| 14q32-encoded microRNAs mediate an oligometastatic phenotype A Uppal, SC Wightman, S Mallon, G Oshima, SP Pitroda, Q Zhang, ... Oncotarget 6 (6), 3540, 2015 | 118 | 2015 |
| Circulating plasma extracellular microvesicle microRNA cargo and endothelial dysfunction in children with obstructive sleep apnea A Khalyfa, L Kheirandish-Gozal, AA Khalyfa, MF Philby, ... American journal of respiratory and critical care medicine 194 (9), 1116-1126, 2016 | 111 | 2016 |
| Arterialization requires the timely suppression of cell growth W Luo, I Garcia-Gonzalez, M Fernández-Chacón, V Casquero-Garcia, ... Nature 589 (7842), 437-441, 2021 | 93 | 2021 |
| RIG-I–like receptor LGP2 protects tumor cells from ionizing radiation RC Widau, AD Parekh, MC Ranck, DW Golden, KA Kumar, RF Sood, ... Proceedings of the National Academy of Sciences 111 (4), E484-E491, 2014 | 89 | 2014 |
| Effect on intermittent hypoxia on plasma exosomal micro RNA signature and endothelial function in healthy adults A Khalyfa, C Zhang, AA Khalyfa, GE Foster, AE Beaudin, J Andrade, ... Sleep 39 (12), 2077-2090, 2016 | 88 | 2016 |
| The epitope space of the human proteome L Berglund, J Andrade, J Odeberg, M Uhlén Protein Science 17 (4), 606-613, 2008 | 87 | 2008 |
| Control of endothelial quiescence by FOXO-regulated metabolites J Andrade, C Shi, ASH Costa, J Choi, J Kim, A Doddaballapur, T Sugino, ... Nature cell biology 23 (4), 413-423, 2021 | 82 | 2021 |
| Gene expression profiling of E wing sarcoma tumours reveals the prognostic importance of tumour–stromal interactions: a report from the C hildren's O ncology G roup SL Volchenboum, J Andrade, L Huang, DA Barkauskas, M Krailo, ... The Journal of Pathology: Clinical Research 1 (2), 83-94, 2015 | 82 | 2015 |
Riyue BaoAssociate Professor, UPitt Medicine; Co-Director Bioinformatics, UPMC Hillman Cancer CenterVerified email at pitt.edu
