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Juan Caballero Pérez
Juan Caballero Pérez
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Year
Insights into land plant evolution garnered from the Marchantia polymorpha genome
JL Bowman, T Kohchi, KT Yamato, J Jenkins, S Shu, K Ishizaki, ...
Cell 171 (2), 287-304. e15, 2017
10072017
Three crocodilian genomes reveal ancestral patterns of evolution among archosaurs
RE Green, EL Braun, J Armstrong, D Earl, N Nguyen, G Hickey, ...
Science 346 (6215), 1254449, 2014
3672014
A bistable circuit involving SCARECROW-RETINOBLASTOMA integrates cues to inform asymmetric stem cell division
A Cruz-Ramírez, S Díaz-Triviño, I Blilou, VA Grieneisen, R Sozzani, ...
Cell 150 (5), 1002-1015, 2012
2962012
Kaviar: an accessible system for testing SNV novelty
G Glusman, J Caballero, DE Mauldin, L Hood, JC Roach
Bioinformatics 27 (22), 3216-3217, 2011
2452011
A family of microRNAs present in plants and animals
M Arteaga-Vázquez, J Caballero-Pérez, JP Vielle-Calzada
The Plant Cell 18 (12), 3355-3369, 2006
2062006
Transcript profiling of Zea mays roots reveals gene responses to phosphate deficiency at the plant-and species-specific levels
C Calderon-Vazquez, E Ibarra-Laclette, J Caballero-Perez, ...
Journal of experimental botany 59 (9), 2479, 2008
1622008
The genome of Bacillus coahuilensis reveals adaptations essential for survival in the relic of an ancient marine environment
LD Alcaraz, G Olmedo, G Bonilla, R Cerritos, G Hernández, A Cruz, ...
Proceedings of the National Academy of Sciences 105 (15), 5803, 2008
1292008
An international effort towards developing standards for best practices in analysis, interpretation and reporting of clinical genome sequencing results in the CLARITY Challenge
CA Brownstein, AH Beggs, N Homer, B Merriman, TW Yu, KC Flannery, ...
Genome biology 15, 1-18, 2014
1212014
MGnify: the microbiome sequence data analysis resource in 2023
L Richardson, B Allen, G Baldi, M Beracochea, ML Bileschi, T Burdett, ...
Nucleic Acids Research 51 (D1), D753-D759, 2023
1002023
Ancient origin and recent innovations of RNA Polymerase IV and V
Y Huang, T Kendall, ES Forsythe, A Dorantes-Acosta, S Li, ...
Molecular Biology and Evolution, 2015
902015
Cell type-specific genes show striking and distinct patterns of spatial expression in the mouse brain
Y Ko, SA Ament, JA Eddy, J Caballero, JC Earls, L Hood, ND Price
Proceedings of the National Academy of Sciences 110 (8), 3095-3100, 2013
902013
Relationship estimation from whole-genome sequence data
H Li, G Glusman, H Hu, J Caballero, R Hubley, D Witherspoon, ...
PLoS genetics 10 (1), e1004144, 2014
852014
Multiple lineages of ancient CR1 retroposons shaped the early genome evolution of amniotes
A Suh, G Churakov, MP Ramakodi, RN Platt, J Jurka, KK Kojima, ...
Genome biology and evolution 7 (1), 205-217, 2015
632015
Identification of novel drought-tolerant-associated SNPs in common bean (Phaseolus vulgaris)
E Villordo-Pineda, MM González-Chavira, P Giraldo-Carbajo, ...
Frontiers in Plant Science 6, 144092, 2015
562015
A cell-surface membrane protein signature for glioblastoma
D Ghosh, CC Funk, J Caballero, N Shah, K Rouleau, JC Earls, ...
Cell systems 4 (5), 516-529. e7, 2017
462017
Functional analysis of the Arabidopsis PLDZ2 promoter reveals an evolutionarily conserved low-Pi-responsive transcriptional enhancer element
A Oropeza-Aburto, A Cruz-Ramírez, GJ Acevedo-Hernández, ...
Journal of experimental botany 63 (5), 2189-2202, 2012
432012
Cooked common beans (Phaseolus vulgaris L.) modulate renal genes in streptozotocin-induced diabetic rats
C Lomas-Soria, IF Pérez-Ramírez, J Caballero-Pérez, ...
The Journal of nutritional biochemistry 26 (7), 761-768, 2015
362015
Identification of Blood Protein Biomarkers of Acute Liver Injury by Targeted Quantitative Proteomics in Acetaminophen and Carbon tetrachloride treated Mouse Models and …
S Qin, Y Zhou, L Gray, U Kusebauch, L McEvoy, DJ Antoine, L Hampson, ...
J. Proteome Res 15 (10), 3724–3740, 2016
35*2016
Realistic artificial DNA sequences as negative controls for computational genomics
J Caballero, AFA Smit, L Hood, G Glusman
Nucleic Acids Research, 2014
342014
Optimal Scaling of Digital Transcriptomes
G Glusman, J Caballero, M Robinson, B Kutlu, L Hood
PLOS ONE 8 (11), e77885, 2013
342013
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