Yang Zhang
Yang Zhang
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I-TASSER: a unified platform for automated protein structure and function prediction
A Roy, A Kucukural, Y Zhang
Nature protocols 5 (4), 725-738, 2010
The I-TASSER Suite: protein structure and function prediction
J Yang, R Yan, A Roy, D Xu, J Poisson, Y Zhang
Nature methods 12 (1), 7, 2015
I-TASSER server for protein 3D structure prediction
Y Zhang
BMC bioinformatics 9 (1), 40, 2008
TM-align: a protein structure alignment algorithm based on the TM-score
Y Zhang, J Skolnick
Nucleic acids research 33 (7), 2302-2309, 2005
I-TASSER server: new development for protein structure and function predictions
J Yang, Y Zhang
Nucleic acids research 43, W174-W181, 2015
Scoring function for automated assessment of protein structure template quality
Y Zhang, J Skolnick
Proteins: Structure, Function, and Bioinformatics 57 (4), 702-710, 2004
Ab initio protein structure assembly using continuous structure fragments and optimized knowledge‐based force field
D Xu, Y Zhang
Proteins: Structure, Function, and Bioinformatics 80 (7), 1715-1735, 2012
Improving the physical realism and structural accuracy of protein models by a two-step atomic-level energy minimization
D Xu, Y Zhang
Biophysical journal 101 (10), 2525-2534, 2011
LOMETS: a local meta-threading-server for protein structure prediction
S Wu, Y Zhang
Nucleic acids research 35 (10), 3375-3382, 2007
Protein–ligand binding site recognition using complementary binding-specific substructure comparison and sequence profile alignment
J Yang, A Roy, Y Zhang
Bioinformatics 29 (20), 2588-2595, 2013
How significant is a protein structure similarity with TM-score= 0.5?
J Xu, Y Zhang
Bioinformatics 26 (7), 889-895, 2010
COFACTOR: an accurate comparative algorithm for structure-based protein function annotation
A Roy, J Yang, Y Zhang
Nucleic acids research 40 (W1), W471-W477, 2012
BioLiP: a semi-manually curated database for biologically relevant ligand–protein interactions
J Yang, A Roy, Y Zhang
Nucleic acids research 41 (D1), D1096-D1103, 2013
Progress and challenges in protein structure prediction
Y Zhang
Current opinion in structural biology 18 (3), 342-348, 2008
Ab initio modeling of small proteins by iterative TASSER simulations
S Wu, J Skolnick, Y Zhang
BMC biology 5 (1), 17, 2007
Template‐based modeling and free modeling by I‐TASSER in CASP7
Y Zhang
Proteins: Structure, Function, and Bioinformatics 69 (S8), 108-117, 2007
COFACTOR: improved protein function prediction by combining structure, sequence and protein–protein interaction information
C Zhang, PL Freddolino, Y Zhang
Nucleic Acids Research 45, W291-W299, 2017
I‐TASSER: Fully automated protein structure prediction in CASP8
Y Zhang
Proteins: Structure, Function, and Bioinformatics 77 (S9), 100-113, 2009
Protein Structure and Function Prediction Using I‐TASSER
J Yang, Y Zhang
Current Protocols in Bioinformatics 52, 5.8.1-5.8.15, 2015
SPICKER: a clustering approach to identify near‐native protein folds
Y Zhang, J Skolnick
Journal of computational chemistry 25 (6), 865-871, 2004
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