Hiroki R. Ueda
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The transcriptional landscape of the mammalian genome
P Carninci, T Kasukawa, S Katayama, J Gough, MC Frith, N Maeda, ...
Science 309 (5740), 1559-1563, 2005
34192005
A transcription factor response element for gene expression during circadian night
HR Ueda, W Chen, A Adachi, H Wakamatsu, S Hayashi, T Takasugi, ...
Nature 418 (6897), 534-539, 2002
8952002
System-level identification of transcriptional circuits underlying mammalian circadian clocks
HR Ueda, S Hayashi, W Chen, M Sano, M Machida, Y Shigeyoshi, M Iino, ...
Nature genetics 37 (2), 187-192, 2005
7712005
Whole-brain imaging with single-cell resolution using chemical cocktails and computational analysis
EA Susaki, K Tainaka, D Perrin, F Kishino, T Tawara, TM Watanabe, ...
Cell 157 (3), 726-739, 2014
7482014
Maintenance of self‐renewal ability of mouse embryonic stem cells in the absence of DNA methyltransferases Dnmt1, Dnmt3a and Dnmt3b
A Tsumura, T Hayakawa, Y Kumaki, S Takebayashi, M Sakaue, ...
Genes to Cells 11 (7), 805-814, 2006
4972006
Thyrotrophin in the pars tuberalis triggers photoperiodic response
N Nakao, H Ono, T Yamamura, T Anraku, T Takagi, K Higashi, S Yasuo, ...
Nature 452 (7185), 317-322, 2008
4382008
An improved single-cell cDNA amplification method for efficient high-density oligonucleotide microarray analysis
K Kurimoto, Y Yabuta, Y Ohinata, Y Ono, KD Uno, RG Yamada, HR Ueda, ...
Nucleic acids research 34 (5), e42-e42, 2006
4222006
Feedback repression is required for mammalian circadian clock function
TK Sato, RG Yamada, H Ukai, JE Baggs, LJ Miraglia, TJ Kobayashi, ...
Nature genetics 38 (3), 312-319, 2006
3852006
Quartz-Seq: a highly reproducible and sensitive single-cell RNA sequencing method, reveals non-genetic gene-expression heterogeneity
Y Sasagawa, I Nikaido, T Hayashi, H Danno, KD Uno, T Imai, HR Ueda
Genome biology 14 (4), 1-17, 2013
3212013
Genome-wide Transcriptional Orchestration of Circadian Rhythms inDrosophila
HR Ueda, A Matsumoto, M Kawamura, M Iino, T Tanimura, S Hashimoto
Journal of biological chemistry 277 (16), 14048-14052, 2002
3142002
Genome-wide Transcriptional Orchestration of Circadian Rhythms inDrosophila
HR Ueda, A Matsumoto, M Kawamura, M Iino, T Tanimura, S Hashimoto
Journal of Biological Chemistry 277 (16), 14048-14052, 2002
3142002
Advanced CUBIC protocols for whole-brain and whole-body clearing and imaging
EA Susaki, K Tainaka, D Perrin, H Yukinaga, A Kuno, HR Ueda
Nature protocols 10 (11), 1709, 2015
3132015
Whole-body imaging with single-cell resolution by tissue decolorization
K Tainaka, SI Kubota, TQ Suyama, EA Susaki, D Perrin, ...
Cell 159 (4), 911-924, 2014
2892014
Delay in feedback repression by cryptochrome 1 is required for circadian clock function
M Ukai-Tadenuma, RG Yamada, H Xu, JA Ripperger, AC Liu, HR Ueda
Cell 144 (2), 268-281, 2011
2372011
Measurement of internal body time by blood metabolomics
Y Minami, T Kasukawa, Y Kakazu, M Iigo, M Sugimoto, S Ikeda, A Yasui, ...
Proceedings of the National Academy of Sciences 106 (24), 9890-9895, 2009
2302009
CKIε/δ-dependent phosphorylation is a temperature-insensitive, period-determining process in the mammalian circadian clock
Y Isojima, M Nakajima, H Ukai, H Fujishima, RG Yamada, K Masumoto, ...
Proceedings of the National Academy of Sciences 106 (37), 15744-15749, 2009
2212009
A functional genomics strategy reveals clockwork orange as a transcriptional regulator in the Drosophila circadian clock
A Matsumoto, M Ukai-Tadenuma, RG Yamada, J Houl, KD Uno, ...
Genes & development 21 (13), 1687-1700, 2007
1842007
Robust oscillations within the interlocked feedback model of Drosophila circadian rhythm
HR Ueda, M Hagiwara, H Kitano
Journal of theoretical biology 210 (4), 401-406, 2001
1832001
Systems biology of mammalian circadian clocks
H Ukai, HR Ueda
Annual review of physiology 72, 579-603, 2010
1772010
Human blood metabolite timetable indicates internal body time
T Kasukawa, M Sugimoto, A Hida, Y Minami, M Mori, S Honma, K Honma, ...
Proceedings of the National Academy of Sciences 109 (37), 15036-15041, 2012
1682012
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