Peptide binding predictions for HLA DR, DP and DQ molecules P Wang, J Sidney, Y Kim, A Sette, O Lund, M Nielsen, B Peters
BMC bioinformatics 11, 1-12, 2010
690 2010 Measurement of the Ratio {sigma}{sub tt}/{sigma}{sub Z/{gamma}}{sup*}{sub {yields} ll} and Precise Extraction of the tt Cross Section T Aaltonen, P Mehtala, R Orava, K Osterberg, H Saarikko, N van Remortel, ...
Physical Review Letters 105 (1), 2010
593 2010 Immune epitope database analysis resource Y Kim, J Ponomarenko, Z Zhu, D Tamang, P Wang, J Greenbaum, ...
Nucleic acids research 40 (W1), W525-W530, 2012
517 2012 Pre-existing immunity against swine-origin H1N1 influenza viruses in the general human population JA Greenbaum, MF Kotturi, Y Kim, C Oseroff, K Vaughan, N Salimi, R Vita, ...
Proceedings of the National Academy of Sciences 106 (48), 20365-20370, 2009
391 2009 Immune epitope database analysis resource (IEDB-AR) Q Zhang, P Wang, Y Kim, P Haste-Andersen, J Beaver, PE Bourne, ...
Nucleic acids research 36 (suppl_2), W513-W518, 2008
389 2008 Memory T Cells in Latent Mycobacterium tuberculosis Infection Are Directed against Three Antigenic Islands and Largely Contained in a CXCR3+ CCR6+ Th1 … CS Lindestam Arlehamn, A Gerasimova, F Mele, R Henderson, J Swann, ...
PLoS pathogens 9 (1), e1003130, 2013
246 2013 Derivation of an amino acid similarity matrix for peptide: MHC binding and its application as a Bayesian prior Y Kim, J Sidney, C Pinilla, A Sette, B Peters
BMC bioinformatics 10, 1-11, 2009
234 2009 Evidence for production and measurement of T Aaltonen, BÁ González, S Amerio, D Amidei, A Anastassov, A Annovi, ...
Physical Review D 84 (3), 031104, 2011
186 2011 Analysis of heritability and shared heritability based on genome-wide association studies for 13 cancer types JN Sampson, WA Wheeler, M Yeager, O Panagiotou, Z Wang, SI Berndt, ...
Journal of the National Cancer Institute 107 (12), djv279, 2015
181 2015 Determination of the top-quark pole mass using + 1-jet events collected with the ATLAS experiment in 7 TeV pp collisions G Aad, B Abbott, J Abdallah, S Abdel Khalek, R Aben, B Abi, M Abolins, ...
Journal of High Energy Physics 2015 (10), 1-41, 2015
155 2015 Automated benchmarking of peptide-MHC class I binding predictions T Trolle, IG Metushi, JA Greenbaum, Y Kim, J Sidney, O Lund, A Sette, ...
Bioinformatics 31 (13), 2174-2181, 2015
138 2015 A unified and quantitative receptor model for the microtubule binding of paclitaxel and epothilone M Wang, X Xia, Y Kim, D Hwang, JM Jansen, M Botta, DC Liotta, ...
Organic letters 1 (1), 43-46, 1999
137 1999 Search for the direct production of charginos and neutralinos in final states with tau leptons in pp collisions with the ATLAS detector M Aaboud, G Aad, B Abbott, O Abdinov, B Abeloos, SH Abidi, ...
The European Physical Journal C 78, 1-33, 2018
122 2018 Detecting conserved interaction patterns in biological networks M Koyutürk, Y Kim, S Subramaniam, W Szpankowski, A Grama
Journal of Computational Biology 13 (7), 1299-1322, 2006
115 2006 Imputation and subset-based association analysis across different cancer types identifies multiple independent risk loci in the TERT-CLPTM1L region on … Z Wang, B Zhu, M Zhang, H Parikh, J Jia, CC Chung, JN Sampson, ...
Human molecular genetics 23 (24), 6616-6633, 2014
103 2014 Vaccines based on replication incompetent Ad26 viral vectors: Standardized template with key considerations for a risk/benefit assessment J Custers, D Kim, M Leyssen, M Gurwith, F Tomaka, J Robertson, ...
Vaccine 39 (22), 3081-3101, 2021
89 2021 Dataset size and composition impact the reliability of performance benchmarks for peptide-MHC binding predictions Y Kim, J Sidney, S Buus, A Sette, M Nielsen, B Peters
BMC bioinformatics 15, 1-9, 2014
85 2014 Measurement of and Production in Collisions at D Acosta, J Adelman, T Affolder, T Akimoto, MG Albrow, D Ambrose, ...
Physical review letters 94 (4), 041803, 2005
80 2005 Search for a Higgs Boson in H b in Collisions at TeV T Aaltonen
Phys. Rev. Lett., 101802, 2009
72 2009 Applications for T-cell epitope queries and tools in the Immune Epitope Database and Analysis Resource Y Kim, A Sette, B Peters
Journal of immunological methods 374 (1-2), 62-69, 2011
71 2011