VIPERdb2: an enhanced and web API enabled relational database for structural virology M Carrillo-Tripp, CM Shepherd, IA Borelli, S Venkataraman, G Lander, ... Nucleic acids research 37 (suppl_1), D436-D442, 2009 | 427 | 2009 |
A comparative study of the hydration of and with refined polarizable model potentials M Carrillo-Tripp, H Saint-Martin, I Ortega-Blake The Journal of Chemical Physics 118 (15), 7062-7073, 2003 | 169 | 2003 |
Evidence for a mechanism by which ω-3 polyunsaturated lipids may affect membrane protein function M Carrillo-Tripp, SE Feller Biochemistry 44 (30), 10164-10169, 2005 | 109 | 2005 |
Minimalist molecular model for nanopore selectivity M Carrillo-Tripp, H Saint-Martin, I Ortega-Blake Physical review letters 93 (16), 168104, 2004 | 67 | 2004 |
Antagonism or synergism between papaya ringspot virus and papaya mosaic virus in Carica papaya is determined by their order of infection G Chávez-Calvillo, CA Contreras-Paredes, J Mora-Macias, ... Virology 489, 179-191, 2016 | 55 | 2016 |
Ion hydration in nanopores and the molecular basis of selectivity M Carrillo-Tripp, ML San-Román, J Hernańdez-Cobos, H Saint-Martin, ... Biophysical Chemistry 124 (3), 243-250, 2006 | 48 | 2006 |
Evolution of substrate specificity in a recipient’s enzyme following horizontal gene transfer L Noda-García, AR Camacho-Zarco, S Medina-Ruíz, P Gaytán, ... Molecular biology and evolution 30 (9), 2024-2034, 2013 | 38 | 2013 |
VIPERdb: a tool for virus research PT Ho, DJ Montiel-Garcia, JJ Wong, M Carrillo-Tripp, CL Brooks III, ... Annual Review of Virology 5, 477-488, 2018 | 28 | 2018 |
A theoretical study of the hydration of Li+ by Monte Carlo simulations with refined ab initio based model potentials ML San-Román, M Carrillo-Tripp, H Saint-Martin, J Hernández-Cobos, ... Theoretical Chemistry Accounts 115 (2), 177-189, 2006 | 28 | 2006 |
Evolution of substrate specificity in a retained enzyme driven by gene loss AL Juárez-Vázquez, JN Edirisinghe, EA Verduzco-Castro, K Michalska, ... Elife 6, e22679, 2017 | 24 | 2017 |
An amphotericin B derivative equally potent to amphotericin B and with increased safety A Antillón, AH De Vries, M Espinosa-Caballero, JM Falcón-González, ... PLoS One 11 (9), e0162171, 2016 | 22 | 2016 |
A novel method to map and compare protein–protein interactions in spherical viral capsids M Carrillo‐Tripp, CL Brooks III, VS Reddy Proteins: Structure, Function, and Bioinformatics 73 (3), 644-655, 2008 | 22 | 2008 |
HTMoL: full-stack solution for remote access, visualization, and analysis of molecular dynamics trajectory data M Carrillo-Tripp, L Alvarez-Rivera, OI Lara-Ramírez, FJ Becerra-Toledo, ... Journal of Computer-Aided Molecular Design 32 (8), 869-876, 2018 | 19 | 2018 |
Highly efficient strategy for the heterologous expression and purification of soluble Cowpea chlorotic mottle virus capsid protein and in vitro pH-dependent assembly of virus … A Díaz-Valle, YM García-Salcedo, G Chávez-Calvillo, L Silva-Rosales, ... Journal of virological methods 225, 23-29, 2015 | 19 | 2015 |
Insights into the evolution of enzyme substrate promiscuity after the discovery of (βα) 8 isomerase evolutionary intermediates from a diverse metagenome L Noda-García, AL Juárez-Vázquez, MC Ávila-Arcos, EA Verduzco-Castro, ... BMC evolutionary biology 15 (1), 1-14, 2015 | 17 | 2015 |
VIPERdb v3. 0: a structure-based data analytics platform for viral capsids D Montiel-Garcia, N Santoyo-Rivera, P Ho, M Carrillo-Tripp, CLB Iii, ... Nucleic Acids Research 49 (D1), D809-D816, 2021 | 15 | 2021 |
Multi-phase solvation model for biological membranes: molecular action mechanism of amphotericin B JM Falcón-González, G Jiménez-Domínguez, I Ortega-Blake, ... Journal of Chemical Theory and Computation 13 (7), 3388-3397, 2017 | 15 | 2017 |
Immune response to a potyvirus with exposed amino groups available for chemical conjugation CA Manuel-Cabrera, A Márquez-Aguirre, HG Rodolfo, PC Ortiz-Lazareno, ... Virology journal 9 (1), 1-11, 2012 | 10 | 2012 |
Analyzing structural alterations of mitochondrial intermembrane space superoxide scavengers cytochrome-c and SOD1 after methylglyoxal treatment H Mercado-Uribe, M Andrade-Medina, JH Espinoza-Rodríguez, ... PLoS One 15 (4), e0232408, 2020 | 9 | 2020 |
CapsidMaps: Protein–protein interaction pattern discovery platform for the structural analysis of virus capsids using Google Maps M Carrillo-Tripp, DJ Montiel-García, CL Brooks III, VS Reddy Journal of structural biology 190 (1), 47-55, 2015 | 9 | 2015 |