Riyue Bao
Riyue Bao
Associate Professor, UPitt Medicine; Co-Director Bioinformatics, UPMC Hillman Cancer Center
Verified email at
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Melanoma-intrinsic β-catenin signalling prevents anti-tumour immunity
S Spranger, R Bao, TF Gajewski
Nature 523 (7559), 231-235, 2015
The commensal microbiome is associated with anti–PD-1 efficacy in metastatic melanoma patients
V Matson, J Fessler, R Bao, T Chongsuwat, Y Zha, ML Alegre, JJ Luke, ...
Science 359 (6371), 104-108, 2018
The genome of the model beetle and pest Tribolium castaneum.
S Richards, RA Gibbs, GM Weinstock, SJ Brown, R Denell, RW Beeman, ...
Nature 452 (7190), 949-955, 2008
WNT/β-catenin pathway activation correlates with immune exclusion across human cancers
JJ Luke, R Bao, RF Sweis, S Spranger, TF Gajewski
Clinical Cancer Research 25 (10), 3074-3083, 2019
Healthy infants harbor intestinal bacteria that protect against food allergy
T Feehley, CH Plunkett, R Bao, SM Choi Hong, E Culleen, P Belda-Ferre, ...
Nature medicine 25 (3), 448-453, 2019
Density of immunogenic antigens does not explain the presence or absence of the T-cell–inflamed tumor microenvironment in melanoma
S Spranger, JJ Luke, R Bao, Y Zha, KM Hernandez, Y Li, AP Gajewski, ...
Proceedings of the National Academy of Sciences 113 (48), E7759-E7768, 2016
T cell–inflamed versus non-T cell–inflamed tumors: a conceptual framework for cancer immunotherapy drug development and combination therapy selection
JA Trujillo, RF Sweis, R Bao, JJ Luke
Cancer immunology research 6 (9), 990-1000, 2018
Molecular drivers of the non–T-cell-inflamed tumor microenvironment in urothelial bladder cancer
RF Sweis, S Spranger, R Bao, GP Paner, WM Stadler, G Steinberg, ...
Cancer immunology research 4 (7), 563-568, 2016
Reimagining IDO pathway inhibition in cancer immunotherapy via downstream focus on the tryptophan–kynurenine–aryl hydrocarbon axis
BW Labadie, R Bao, JJ Luke
Clinical Cancer Research 25 (5), 1462-1471, 2019
Review of current methods, applications, and data management for the bioinformatics analysis of whole exome sequencing
R Bao, L Huang, J Andrade, W Tan, WA Kibbe, H Jiang, G Feng
Cancer informatics 13, CIN. S13779, 2014
A massive expansion of effector genes underlies gall-formation in the wheat pest Mayetiola destructor
C Zhao, LN Escalante, H Chen, TR Benatti, J Qu, S Chellapilla, ...
Current Biology 25 (5), 613-620, 2015
Analysis and correction of crosstalk effects in pathway analysis
M Donato, Z Xu, A Tomoiaga, JG Granneman, RG MacKenzie, R Bao, ...
Genome research 23 (11), 1885-1893, 2013
Pembrolizumab plus ipilimumab following anti-PD-1/L1 failure in melanoma
DJ Olson, Z Eroglu, B Brockstein, AS Poklepovic, M Bajaj, S Babu, ...
Journal of Clinical Oncology 39 (24), 2647, 2021
Investigating immune and non-immune cell interactions in head and neck tumors by single-cell RNA sequencing
CHL Kürten, A Kulkarni, AR Cillo, PM Santos, AK Roble, S Onkar, ...
Nature communications 12 (1), 7338, 2021
PD-L1 gene alterations identify a subset of diffuse large B-cell lymphoma harboring a T-cell–inflamed phenotype
J Godfrey, S Tumuluru, R Bao, M Leukam, G Venkataraman, J Phillip, ...
Blood, The Journal of the American Society of Hematology 133 (21), 2279-2290, 2019
Genomic and gene regulatory signatures of cryptozoic adaptation: Loss of blue sensitive photoreceptors through expansion of long wavelength-opsin expression in the red flour …
M Jackowska, R Bao, Z Liu, EC McDonald, TA Cook, M Friedrich
Frontiers in zoology 4, 1-11, 2007
Overcoming PD-1 blockade resistance with CpG-A toll-like receptor 9 agonist vidutolimod in patients with metastatic melanoma
A Ribas, T Medina, JM Kirkwood, Y Zakharia, R Gonzalez, D Davar, ...
Cancer discovery 11 (12), 2998-3007, 2021
Development and validation of a combined hypoxia and immune prognostic classifier for head and neck cancer
JM Brooks, AN Menezes, M Ibrahim, L Archer, N Lal, CJ Bagnall, ...
Clinical Cancer Research 25 (17), 5315-5328, 2019
Fecal microbiome and metabolome differ in healthy and food-allergic twins
R Bao, LA Hesser, Z He, X Zhou, KC Nadeau, CR Nagler
The Journal of clinical investigation 131 (2), 2021
Phototransduction and clock gene expression in the troglobiont beetle Ptomaphagus hirtus of Mammoth cave
M Friedrich, R Chen, B Daines, R Bao, J Caravas, PK Rai, M Zagmajster, ...
Journal of Experimental Biology 214 (21), 3532-3541, 2011
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