Robert Thomson
Robert Thomson
Professor, School of Life Sciences, University of Hawaii
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The western painted turtle genome, a model for the evolution of extreme physiological adaptations in a slowly evolving lineage
HB Shaffer, P Minx, DE Warren, AM Shedlock, RC Thomson, ...
Genome biology 14 (3), 1-23, 2013
Delimiting species in recent radiations
HB Shaffer, RC Thomson
Systematic Biology 56 (6), 896-906, 2007
Sparse supermatrices for phylogenetic inference: taxonomy, alignment, rogue taxa, and the phylogeny of living turtles
RC Thomson, HB Shaffer
Systematic biology 59 (1), 42-58, 2010
Genome‐enabled development of DNA markers for ecology, evolution and conservation
RC Thomson, IJ Wang, JR Johnson
Molecular Ecology 19 (11), 2184-2195, 2010
Phylogenomics reveals ancient gene tree discordance in the amphibian tree of life
PM Hime, AR Lemmon, ECM Lemmon, E Prendini, JM Brown, ...
Systematic biology 70 (1), 49-66, 2021
Bayes factors unmask highly variable information content, bias, and extreme influence in phylogenomic analyses
JM Brown, RC Thomson
Systematic biology 66 (4), 517-530, 2017
A global phylogeny of turtles reveals a burst of climate-associated diversification on continental margins
RC Thomson, PQ Spinks, HB Shaffer
Proceedings of the National Academy of Sciences 118 (7), 2021
California Amphibian and Reptile Species of Special Concern
RC Thomson, AN Wright, HB Shaffer
University of California Press, 2016
Fourteen nuclear genes provide phylogenetic resolution for difficult nodes in the turtle tree of life
AJ Barley, PQ Spinks, RC Thomson, HB Shaffer
Molecular Phylogenetics and Evolution 55 (3), 1189-1194, 2010
The advantages of going large: genome‐wide SNPs clarify the complex population history and systematics of the threatened western pond turtle
PQ Spinks, RC Thomson, HB Shaffer
Molecular ecology 23 (9), 2228-2241, 2014
Impact of Model Violations on the Inference of Species Boundaries Under the Multispecies Coalescent
AJ Barley, JM Brown, RC Thomson
Systematic Biology 67 (2), 269-284, 2018
Phylogenomics and species delimitation in the knob-scaled lizards of the genus Xenosaurus (Squamata: Xenosauridae) using ddRADseq data reveal a substantial underestimation of …
ANM de Oca, AJ Barley, RN Meza-Lázaro, UO García-Vázquez, ...
Molecular Phylogenetics and Evolution 106, 241-253, 2017
Developing markers for multilocus phylogenetics in non-model organisms: A test case with turtles
RC Thomson, AM Shedlock, SV Edwards, HB Shaffer
Molecular Phylogenetics and Evolution 49 (2), 514-525, 2008
A critical appraisal of the use of microRNA data in phylogenetics
RC Thomson, DC Plachetzki, DL Mahler, BR Moore
Proceedings of the National Academy of Sciences 111 (35), E3659-E3668, 2014
Biomechanical trade-offs bias rates of evolution in the feeding apparatus of fishes
R Holzman, DC Collar, SA Price, CD Hulsey, RC Thomson, ...
Proceedings of the Royal Society of London B: Biological Sciences 279 (1732 …, 2012
Assessing what is needed to resolve a molecular phylogeny: simulations and empirical data from emydid turtles
PQ Spinks, RC Thomson, GA Lovely, HB Shaffer
BMC Evolutionary Biology 9, 1-17, 2009
Nuclear gene phylogeography reveals the historical legacy of an ancient inland sea on lineages of the western pond turtle, Emys marmorata in California
Molecular Ecology 19 (3), 542-556, 2010
In search of the tree of life for turtles
JB Iverson, RM Brown, TS Akre, TJ Near, M Le, RC Thomson, DE Starkey
Definiting turtle diversity: proceedings of a workshop on genetics, ethics …, 2007
Misleading phylogenetic inferences based on single-exemplar sampling in the turtle genus Pseudemys
PQ Spinks, RC Thomson, GB Pauly, CE Newman, G Mount, HB Shaffer
Molecular Phylogenetics and Evolution 68 (2), 269-281, 2013
Variation across mitochondrial gene trees provides evidence for systematic error: How much gene tree variation is biological?
EJ Richards, JM Brown, AJ Barley, RA Chong, RC Thomson
Systematic biology 67 (5), 847-860, 2018
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